Stem-loop cpa-MIR8145

Accession

MI0026394

Description

Carica papaya cpa-MIR8145 precursor miRNA

Sequence

ggugcauguuuauuuauuuaugugauuauauucgauuucguaauggagacuaaggaaaaauaggaaaggagugugaucaaAUAAACAGAUAGAAUGACAGCCUU
(((((((.(((((((.(((((.(((((((((((..((((.((..................)).)))).))))))))))).))))).)))))))))).)).))..

Structure

--  -  -   g       a     g           ga    g  auggagac 
  gg ug cau uuuauuu uuuau ugauuauauuc  uuuc ua        u
  || || ||| ||||||| ||||| |||||||||||  |||| ||         
  CC AC GUA AGAUAGA AAAUA acuagugugag  aaag au        a
UU  G  A   -       C     a           -g    g  aaaaagga 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR8145

• Accession: MIMAT0031842
• Description: Carica papaya cpa-miR8145 mature miRNA
• Sequence: 81 - AUAAACAGAUAGAAUGACAGCCUU - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682