Stem-loop cpa-MIR8153

Accession

MI0026402

Description

Carica papaya cpa-MIR8153 precursor miRNA

Sequence

acguguagguacuaguagugcguuucagcuccccgaaaaaaauucaggaaaaauuaaggacacccuguaggUGCACUGUAGAGCCGUAUUCGGAC
.((.((((((.(((.(((((((((((((.((((((((.....))).)).........)))....))).))))))))))))).))).))).))...

Structure

--a  u   -   a   g          -   ---c   ---------  -   a 
   cg gua ggu cua uagugcguuu cag    ucc         cc gaa a
   || ||| ||| ||| |||||||||| |||    |||         || ||| a
   GC UAU CCG GAU GUCACGUgga guc    agg         gg cuu a
CAG  U   G   A   -          u   ccac   aauuaaaaa  a   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR8153

• Accession: MIMAT0031850
• Description: Carica papaya cpa-miR8153 mature miRNA
• Sequence: 72 - UGCACUGUAGAGCCGUAUUCGGAC - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682