Stem-loop cpa-MIR8154

Accession

MI0026404

Description

Carica papaya cpa-MIR8154 precursor miRNA

Sequence

CAGAGGAGGAGAUGAAGAGGGAaccuugcuaaagcuccguucuuuugggcucuuuguaggacucccucucccuccuccucuauc
.((((((((((..((.((((((..(((((...(((.(((......))))))....)))))..)))))))).))))))))))...

Structure

--C          AU  A      ac     -uaa   u   uu 
   AGAGGAGGAG  GA GAGGGA  cuugc    agc ccg  c
   ||||||||||  || ||||||  |||||    ||| |||   
   ucuccuccuc  cu cucccu  ggaug    ucg ggu  u
cua          -c  -      ca     uuuc   -   uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR8154

• Accession: MIMAT0031852
• Description: Carica papaya cpa-miR8154 mature miRNA
• Sequence: 1 - CAGAGGAGGAGAUGAAGAGGGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682