miRBase entry: lus-MIR166j

Stem-loop lus-MIR166j


Accession
MI0026407
Description
Linum usitatissimum lus-MIR166j precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
2 open access papers mention lus-MIR166j
(4 sentences)

Sequence

aggggaauguugucuggcccgaagccucuauugacaauggccgaagaucaaauucgggagauggguuuagcgacuUCGGACCAGGCUUCAUUCCCC
.((((((((..((((((.((((((.(.(((....((....(((((.......)))))....))....))).).)))))).))))))..))))))))

Structure
a        uu      c      c u   uuga  augg     ga 
 ggggaaug  gucugg ccgaag c cua    ca    ccgaa  u
 ||||||||  |||||| |||||| | |||    ||    |||||  c
 CCCCUUAC  CGGACC GGCUuc g gau    gu    ggcuu  a
-        UU      A      a c   uugg  agag     aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lus-miR166j

Accession MIMAT0031855
Description Linum usitatissimum lus-miR166j mature miRNA
Sequence 76 - UCGGACCAGGCUUCAUUCCCC - 96
Evidence not_experimental

References

  1. PubMed ID: 22841625
    Identification and characterization of miRNAs and their potential targets in flax
    "Neutelings G, Fenart S, Lucau-Danila A, Hawkins S"
    "J Plant Physiol (2012) 169:1754-1766