Stem-loop ssa-mir-101b-1

Accession

MI0026435

Description

Salmo salar ssa-mir-101b-1 precursor miRNA

Gene family

MIPF0000046; mir-101

Literature search

1 open access papers mention ssa-mir-101b-1
(3 sentences)

Sequence

CAGUUAUCAUGGUACCGGUGCUGUgucccugucaagUACAGUACUAUGAUAACUGAA
(((((((((((((((..(((((............))))).)))))))))))))))..

Structure

--               CG     GUguc 
  CAGUUAUCAUGGUAC  GUGCU     c
  |||||||||||||||  |||||      
  GUCAAUAGUAUCAUG  CAUga     c
AA               -A     acugu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-101b-5p

• Accession: MIMAT0032282
• Description: Salmo salar ssa-miR-101b-5p mature miRNA
• Sequence: 1 - CAGUUAUCAUGGUACCGGUGCUGU - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-101b-3p

• Accession: MIMAT0032283
• Description: Salmo salar ssa-miR-101b-3p mature miRNA
• Sequence: 37 - UACAGUACUAUGAUAACUGAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482