Stem-loop ssa-mir-103

Accession

MI0026437

Description

Salmo salar ssa-mir-103 precursor miRNA

Gene family

MIPF0000024; mir-103

Literature search

1 open access papers mention ssa-mir-103
(3 sentences)

Sequence

AGCCUCUUUAUGAUGCUGCCUUGUggaaucuggaucaAGCAGCAUUGUACAGGGCUAUGA
((((.((.(((((((((((.(((............)))))))))))))).))))))....

Structure

----    U  U           C   Uggaa 
    AGCC CU UAUGAUGCUGC UUG     u
    |||| || ||||||||||| |||      
    UCGG GA AUGUUACGACG Aac     c
AGUA    -  C           -   uaggu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-103-5p

• Accession: MIMAT0032284
• Description: Salmo salar ssa-miR-103-5p mature miRNA
• Sequence: 1 - AGCCUCUUUAUGAUGCUGCCUUGU - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-103-3p

• Accession: MIMAT0032285
• Description: Salmo salar ssa-miR-103-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482