Stem-loop ssa-mir-125a-2

Accession

MI0026453

Description

Salmo salar ssa-mir-125a-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

1 open access papers mention ssa-mir-125a-2
(1 sentences)

Sequence

UCCCUGAGACCCUAACUUGUGAgcucucuccaugaaaaaucACGGGUUAGGCUCUUGGGACGC
..(((((((.((((((((((((....((.....))....)))))))))))).)))))))....

Structure

--UC       C            gcuc  u 
    CCUGAGA CCUAACUUGUGA    uc c
    ||||||| ||||||||||||    || c
    GGGUUCU GGAUUGGGCAcu    ag a
CGCA       C            aaaa  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-125a-5p

• Accession: MIMAT0032304
• Description: Salmo salar ssa-miR-125a-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUAACUUGUGA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-125a-2-3p

• Accession: MIMAT0032306
• Description: Salmo salar ssa-miR-125a-2-3p mature miRNA
• Sequence: 42 - ACGGGUUAGGCUCUUGGGACGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482