miRBase entry: ssa-mir-129-1

Stem-loop ssa-mir-129-1


Accession
MI0026465
Description
Salmo salar ssa-mir-129-1 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

CUUUUUGCGGUCUGGGCUUGCuguucauaaauaucagucugggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.(((..(..........)..))).))))))..))).)))))))...

Structure
---       C   CU      G   uu auaa 
   CUUUUUG GGU  GGGCUU Cug  c    a
   ||||||| |||  |||||| |||  |     
   GAAAAAC CCA  CCCGAA ggu  g    u
UAC       C   UU      g   cu acua 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-129-5p

Accession MIMAT0032318
Description Salmo salar ssa-miR-129-5p mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-129-3p

Accession MIMAT0032319
Description Salmo salar ssa-miR-129-3p mature miRNA
Sequence 44 - AAGCCCUUACCCCAAAAAGCAU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482