miRBase entry: ssa-mir-132-1

Stem-loop ssa-mir-132-1


Accession
MI0026475
Description
Salmo salar ssa-mir-132-1 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

ACCGUGGCUUUAGAUUGUUACUcuagagacagcaccauggUAACAGUCUACAGCCAUGGUCG
(((((((((.((((((((((((................)))))))))))).)))))))))..

Structure
--         U            cuagaga 
  ACCGUGGCU UAGAUUGUUACU       c
  ||||||||| ||||||||||||        
  UGGUACCGA AUCUGACAAUgg       a
GC         C            uaccacg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-132-5p

Accession MIMAT0032331
Description Salmo salar ssa-miR-132-5p mature miRNA
Sequence 1 - ACCGUGGCUUUAGAUUGUUACU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-132-3p

Accession MIMAT0032332
Description Salmo salar ssa-miR-132-3p mature miRNA
Sequence 41 - UAACAGUCUACAGCCAUGGUCG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482