Stem-loop ssa-mir-135b-2

Accession

MI0026487

Description

Salmo salar ssa-mir-135b-2 precursor miRNA

Gene family

MIPF0000028; mir-135

Literature search

1 open access papers mention ssa-mir-135b-2
(1 sentences)

Sequence

UAUGGCUUUCUAUUCCUAUGUGAuuuucucuacuguCACGUAGGGUCCAAAGCCAUUG
.((((((((....(((((((((((..........)))))))))))...))))))))..

Structure

-U        CUAU           uuuc 
  AUGGCUUU    UCCUAUGUGAu    u
  ||||||||    |||||||||||     
  UACCGAAA    GGGAUGCACug    c
GU        -CCU           ucau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-135b-5p

• Accession: MIMAT0032344
• Description: Salmo salar ssa-miR-135b-5p mature miRNA
• Sequence: 1 - UAUGGCUUUCUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-135b-2-3p

• Accession: MIMAT0032346
• Description: Salmo salar ssa-miR-135b-2-3p mature miRNA
• Sequence: 37 - CACGUAGGGUCCAAAGCCAUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482