miRBase entry: ssa-mir-153b

Stem-loop ssa-mir-153b


Accession
MI0026519
Description
Salmo salar ssa-mir-153b precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

UCAUUUUUGUGACGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUC
(((((((((((((..(((((((.((.......))..)))))))..)))))))))))))..

Structure
--             GU       -a  aa 
  UCAUUUUUGUGAC  UGCAGCU  gu  u
  |||||||||||||  |||||||  ||  a
  AGUGAAAACACUG  ACGUUga  cg  u
CU             AU       cc  ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-153b-5p

Accession MIMAT0032390
Description Salmo salar ssa-miR-153b-5p mature miRNA
Sequence 1 - UCAUUUUUGUGACGUUGCAGCU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-153b-3p

Accession MIMAT0032391
Description Salmo salar ssa-miR-153b-3p mature miRNA
Sequence 39 - UUGCAUAGUCACAAAAGUGAUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482