miRBase entry: ssa-mir-15a

Stem-loop ssa-mir-15a


Accession
MI0026522
Description
Salmo salar ssa-mir-15a precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
0 open access papers mention ssa-mir-15a
(0 sentences)

Sequence

CGUAGCAGCACGUCAUGGUUUGUagugauaguaaagaugCAGACCAUGAAGAGCUGCUGCU
.((((((((...((((((((((((.............))))))))))))...)))))))).

Structure
C        ACG            gugau 
 GUAGCAGC   UCAUGGUUUGUa     a
 ||||||||   ||||||||||||     g
 CGUCGUCG   AGUACCAGACgu     u
U        AGA            agaaa 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-15a-5p

Accession MIMAT0032394
Description Salmo salar ssa-miR-15a-5p mature miRNA
Sequence 1 - CGUAGCAGCACGUCAUGGUUUGU - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-15a-3p

Accession MIMAT0032395
Description Salmo salar ssa-miR-15a-3p mature miRNA
Sequence 40 - CAGACCAUGAAGAGCUGCUGCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482