Stem-loop ssa-mir-190b

Accession

MI0026550

Description

Salmo salar ssa-mir-190b precursor miRNA

Gene family

MIPF0000076; mir-190

Sequence

UGAUAUGUUUGAUAUUCGGUUGuucuccugcguaaucaagucaACUAAAUAUCAGACAUAUUCCUA
.(((((((((((((((.(((((...................))))).)))))))))))))))....

Structure

---U               C     uucuccug 
    GAUAUGUUUGAUAUU GGUUG        c
    ||||||||||||||| |||||        g
    UUAUACAGACUAUAA UCAac        u
AUCC               A     ugaacuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-190b-5p

• Accession: MIMAT0032438
• Description: Salmo salar ssa-miR-190b-5p mature miRNA
• Sequence: 1 - UGAUAUGUUUGAUAUUCGGUUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-190b-3p

• Accession: MIMAT0032439
• Description: Salmo salar ssa-miR-190b-3p mature miRNA
• Sequence: 44 - ACUAAAUAUCAGACAUAUUCCUA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482