miRBase entry: ssa-mir-194a-2

Stem-loop ssa-mir-194a-2


Accession
MI0026556
Description
Salmo salar ssa-mir-194a-2 precursor miRNA
Gene family
MIPF0000055; mir-194


Sequence

UGUAACAGCAACUCCAUGUGGAaguugucuguguuCCAGUGGAGAUGCUGUUACCUGC
.(((((((((.((((((.(((((..........))))))))))).)))))))))....

Structure
---U         A      G     guug 
    GUAACAGCA CUCCAU UGGAa    u
    ||||||||| |||||| |||||     
    CAUUGUCGU GAGGUG ACCuu    c
CGUC         A      -     gugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-194a-5p

Accession MIMAT0032447
Description Salmo salar ssa-miR-194a-5p mature miRNA
Sequence 1 - UGUAACAGCAACUCCAUGUGGA - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-194a-3p

Accession MIMAT0032448
Description Salmo salar ssa-miR-194a-3p mature miRNA
Sequence 36 - CCAGUGGAGAUGCUGUUACCUGC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482