Stem-loop ssa-mir-19a-3

Accession

MI0026570

Description

Salmo salar ssa-mir-19a-3 precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

UUUUGCAUAGUUGCAUUAcaaguaaaaaugaguUGUGCAAAUCUAUGCAAAACUG
((((((((((((((((.((..((....))..)).))))))..))))))))))...

Structure

---          --      U  aa  a 
   UUUUGCAUAG  UUGCAU Ac  gu a
   ||||||||||  |||||| ||  ||  
   AAAACGUAUC  AACGUG ug  ua a
GUC          UA      U  ag  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-19a-3p

• Accession: MIMAT0032463
• Description: Salmo salar ssa-miR-19a-3p mature miRNA
• Sequence: 34 - UGUGCAAAUCUAUGCAAAACUG - 55
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-19a-3-5p

• Accession: MIMAT0032464
• Description: Salmo salar ssa-miR-19a-3-5p mature miRNA
• Sequence: 1 - UUUUGCAUAGUUGCAUUA - 18
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482