miRBase entry: ssa-mir-202

Stem-loop ssa-mir-202


Accession
MI0026586
Description
Salmo salar ssa-mir-202 precursor miRNA
Gene family
MIPF0000121; mir-202

Literature search
1 open access papers mention ssa-mir-202
(11 sentences)

Sequence

UUCCUAUGCAUAUACCGCUUUGAgaucuagcuuuAAAGAGGCAUAGGGCAUGGGAA
.((((((((.(((.((.(((((((.......))))))).)).)))..)))))))).

Structure
U        -A   A  G       au 
 UCCUAUGC  UAU CC CUUUGAg  c
 ||||||||  ||| || |||||||  u
 AGGGUACG  AUA GG GAAAuuu  a
A        GG   C  A       cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-202-3p

Accession MIMAT0032481
Description Salmo salar ssa-miR-202-3p mature miRNA
Sequence 1 - UUCCUAUGCAUAUACCGCUUUGA - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-202-5p

Accession MIMAT0032482
Description Salmo salar ssa-miR-202-5p mature miRNA
Sequence 35 - AAAGAGGCAUAGGGCAUGGGAA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482