Stem-loop ssa-mir-203a-1

Accession

MI0026587

Description

Salmo salar ssa-mir-203a-1 precursor miRNA

Gene family

MIPF0000108; mir-203

Sequence

AGUGGUUCUAAAUAGUUCAACAgucuauaccgaaauuGUGAAAUGUUUAGGACCACUUG
((((((((((((((.((((.((((..........)))))))).))))))))))))))..

Structure

--              G    A    cuau 
  AGUGGUUCUAAAUA UUCA CAgu    a
  |||||||||||||| |||| ||||     
  UCACCAGGAUUUGU AAGU Guua    c
GU              A    -    aagc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-203a-5p

• Accession: MIMAT0032483
• Description: Salmo salar ssa-miR-203a-5p mature miRNA
• Sequence: 1 - AGUGGUUCUAAAUAGUUCAACA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-203a-3p

• Accession: MIMAT0032484
• Description: Salmo salar ssa-miR-203a-3p mature miRNA
• Sequence: 38 - GUGAAAUGUUUAGGACCACUUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482