Stem-loop ssa-mir-205a-1

Accession

MI0026594

Description

Salmo salar ssa-mir-205a-1 precursor miRNA

Gene family

MIPF0000058; mir-205

Literature search

0 open access papers mention ssa-mir-205a-1
(0 sentences)

Sequence

UCCUUCAUUCCACCGGAUCCUguuuaccagucugcagAUUCCCAGUGGGAUGAAGCUC
..(((((((((((.(((..((((..........))))..)))..)))))))))))...

Structure

-UC           -C   UC    uuac 
   CUUCAUUCCAC  GGA  CUgu    c
   |||||||||||  |||  ||||     
   GAAGUAGGGUG  CCU  gacg    a
CUC           AC   UA    ucug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-205a-5p

• Accession: MIMAT0032492
• Description: Salmo salar ssa-miR-205a-5p mature miRNA
• Sequence: 1 - UCCUUCAUUCCACCGGAUCCU - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-205a-3p

• Accession: MIMAT0032493
• Description: Salmo salar ssa-miR-205a-3p mature miRNA
• Sequence: 38 - AUUCCCAGUGGGAUGAAGCUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482