miRBase entry: ssa-mir-205b-3

Stem-loop ssa-mir-205b-3


Accession
MI0026598
Description
Salmo salar ssa-mir-205b-3 precursor miRNA
Gene family
MIPF0000058; mir-205

Literature search
0 open access papers mention ssa-mir-205b-3
(0 sentences)

Sequence

UCCUUCAUUCCACCGGAGUCUGugccuuuauccaaacaGAUUUCAGUGAAGUGAAGUGUA
..(((((((.(((.(((((((((............))))))))).))).)))))))....

Structure
--UC       C   C         gccuu 
    CUUCAUU CAC GGAGUCUGu     u
    ||||||| ||| |||||||||      
    GAAGUGA GUG CUUUAGaca     a
AUGU       A   A         aaccu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-205b-5p

Accession MIMAT0032495
Description Salmo salar ssa-miR-205b-5p mature miRNA
Sequence 1 - UCCUUCAUUCCACCGGAGUCUG - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-205b-3-3p

Accession MIMAT0032498
Description Salmo salar ssa-miR-205b-3-3p mature miRNA
Sequence 39 - GAUUUCAGUGAAGUGAAGUGUA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482