Stem-loop ssa-mir-216b

Accession

MI0026615

Description

Salmo salar ssa-mir-216b precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

UAAUCUCAGCUGGCAACUGUGAgcaguucaguguucccucuCACAGUGGCUACUGGGGUUCUG
.((((((((.((((.((((((((.((...........)))))))))).))))))))))))...

Structure

--U        C    A        c  uuca 
   AAUCUCAG UGGC ACUGUGAg ag    g
   |||||||| |||| |||||||| ||    u
   UUGGGGUC AUCG UGACACuc uc    g
GUC        -    G        -  ccuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-216b-5p

• Accession: MIMAT0032518
• Description: Salmo salar ssa-miR-216b-5p mature miRNA
• Sequence: 1 - UAAUCUCAGCUGGCAACUGUGA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-216b-3p

• Accession: MIMAT0032519
• Description: Salmo salar ssa-miR-216b-3p mature miRNA
• Sequence: 42 - CACAGUGGCUACUGGGGUUCUG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482