Stem-loop ssa-mir-219b-2

Accession

MI0026623

Description

Salmo salar ssa-mir-219b-2 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

UGAUUGUCCAAACGCAAUUCUUGugaaauuuaaaacacaacccgAGAAUUGUAUCUGGACAUCUGU
.(((.(((((...((((((((((.(................)))))))))))...))))))))...

Structure

--U   U     AAC          u aaauuua 
   GAU GUCCA   GCAAUUCUUG g       a
   ||| |||||   |||||||||| |        
   CUA CAGGU   UGUUAAGAgc c       a
UGU   -     CUA          - caacaca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-219b-5p

• Accession: MIMAT0032528
• Description: Salmo salar ssa-miR-219b-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-219b-3p

• Accession: MIMAT0032529
• Description: Salmo salar ssa-miR-219b-3p mature miRNA
• Sequence: 45 - AGAAUUGUAUCUGGACAUCUGU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482