miRBase entry: ssa-mir-27b-2

Stem-loop ssa-mir-27b-2


Accession
MI0026660
Description
Salmo salar ssa-mir-27b-2 precursor miRNA
Gene family
MIPF0000036; mir-27


Sequence

AGAGCUUAGCUGAUUGGUGAACagugauugaucuccuuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((.((......))..))))))))))))))))))))))..

Structure
--           G    G       -u  uu 
  AGAGCUUAGCU AUUG UGAACag  ga  g
  ||||||||||| |||| |||||||  ||   
  UCUUGAAUCGG UGAC ACUUguu  cu  a
CG           -    -       uc  cu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-27b-5p

Accession MIMAT0032576
Description Salmo salar ssa-miR-27b-5p mature miRNA
Sequence 1 - AGAGCUUAGCUGAUUGGUGAAC - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-27b-3p

Accession MIMAT0032577
Description Salmo salar ssa-miR-27b-3p mature miRNA
Sequence 41 - UUCACAGUGGCUAAGUUCUGC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482