miRBase entry: ssa-mir-29a

Stem-loop ssa-mir-29a


Accession
MI0026664
Description
Salmo salar ssa-mir-29a precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

CUGGUUUCACAUGGUGGUUUAGAuuaauguucccagugucUAGCACCAUUUGAAAUCAGU
(((((((((.((((((..((((((...((....))..)))))))))))).))))))))).

Structure
-         C      GU      uaa  u 
 CUGGUUUCA AUGGUG  UUAGAu   ug u
 ||||||||| ||||||  ||||||   ||  
 GACUAAAGU UACCAC  GAUcug   ac c
U         U      --      -ug  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-29a-5p

Accession MIMAT0032583
Description Salmo salar ssa-miR-29a-5p mature miRNA
Sequence 1 - CUGGUUUCACAUGGUGGUUUAGA - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-29a-3p

Accession MIMAT0032584
Description Salmo salar ssa-miR-29a-3p mature miRNA
Sequence 41 - UAGCACCAUUUGAAAUCAGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482