Stem-loop ssa-mir-301c

Accession

MI0026672

Description

Salmo salar ssa-mir-301c precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

GCUUUGAUGACGUUGCACUACUguuccaucggcugaagCAGUGCAAUAGUAUUGUCAUGGC
(((.((((.((((((((((.((...((...))....)).)))))))).))...)))).)))

Structure

   U    --G  -        A  -guu  a 
GCU UGAU   AC GUUGCACU CU    cc  
||| ||||   || |||||||| ||    || u
CGG ACUG   UG UAACGUGA ga    gg  
   U    UUA  A        C  aguc  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-301c-5p

• Accession: MIMAT0032596
• Description: Salmo salar ssa-miR-301c-5p mature miRNA
• Sequence: 1 - GCUUUGAUGACGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-301c-3p

• Accession: MIMAT0032597
• Description: Salmo salar ssa-miR-301c-3p mature miRNA
• Sequence: 39 - CAGUGCAAUAGUAUUGUCAUGGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482