miRBase entry: ssa-mir-429

Stem-loop ssa-mir-429


Accession
MI0026698
Description
Salmo salar ssa-mir-429 precursor miRNA
Gene family
MIPF0000019; mir-8

Literature search
1 open access papers mention ssa-mir-429
(1 sentences)

Sequence

GUCUUACCAGACAUGGUUAGaucuaauuaucccugucUAAUACUGUCUGGUAAUGCCG
((.((((((((((..(((((((............)))))))..)))))))))).))..

Structure
--  C          UG       cuaau 
  GU UUACCAGACA  GUUAGau     u
  || ||||||||||  |||||||      
  CG AAUGGUCUGU  UAAUcug     a
GC  U          CA       ucccu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-429-5p

Accession MIMAT0032629
Description Salmo salar ssa-miR-429-5p mature miRNA
Sequence 1 - GUCUUACCAGACAUGGUUAG - 20
Evidence experimental
Illumina [1]

Mature ssa-miR-429-3p

Accession MIMAT0032630
Description Salmo salar ssa-miR-429-3p mature miRNA
Sequence 38 - UAAUACUGUCUGGUAAUGCCG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482