Stem-loop ssa-mir-430a

Accession

MI0026699

Description

Salmo salar ssa-mir-430a precursor miRNA

Gene family

MIPF0000003; mir-430

Literature search

1 open access papers mention ssa-mir-430a
(1 sentences)

Sequence

UACCUGAACACUAGCAUUGACUugucuauauuaugcagUAAGUGCUACUUGUUGGGGUAG
(((((.((((.(((((((.(((.(.(........))))).)))))))..)))).))))).

Structure

-     G    -C       G   u u uau 
 UACCU AACA  UAGCAUU ACU g c   a
 ||||| ||||  ||||||| ||| | |    
 AUGGG UUGU  AUCGUGA Uga c g   u
G     G    UC       A   - - uau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-430a-5p

• Accession: MIMAT0032631
• Description: Salmo salar ssa-miR-430a-5p mature miRNA
• Sequence: 1 - UACCUGAACACUAGCAUUGACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-430a-3p

• Accession: MIMAT0032632
• Description: Salmo salar ssa-miR-430a-3p mature miRNA
• Sequence: 39 - UAAGUGCUACUUGUUGGGGUAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482