miRBase entry: ssa-mir-456-2

Stem-loop ssa-mir-456-2


Accession
MI0026707
Description
Salmo salar ssa-mir-456-2 precursor miRNA
Gene family
MIPF0000341; mir-456


Sequence

GCAGGCAUCUUCCCAGCCUACauguggauccaagaaucugCAGGCUGGUUAGAUGGUUGUCA
((((.(((((..(((((((....((((((......)))))))))))))..))))).))))..

Structure
--    G     UC       ACau      cc 
  GCAG CAUCU  CCAGCCU    guggau  a
  |||| |||||  |||||||    ||||||   
  UGUU GUAGA  GGUCGGA    Cgucua  a
AC    G     UU       ----      ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-456-5p

Accession MIMAT0032645
Description Salmo salar ssa-miR-456-5p mature miRNA
Sequence 1 - GCAGGCAUCUUCCCAGCCUAC - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-456-3p

Accession MIMAT0032646
Description Salmo salar ssa-miR-456-3p mature miRNA
Sequence 41 - CAGGCUGGUUAGAUGGUUGUCA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482