Stem-loop ssa-mir-489-2

Accession

MI0026715

Description

Salmo salar ssa-mir-489-2 precursor miRNA

Gene family

MIPF0000111; mir-489

Sequence

UGGUCGUAUGUAUGACGUCAUUuacuucaacguuuggagUGACAUCAUAUGUACGGCUGCU
.((((((((((((((.(((....(((((((...)))))))))).))))))))))))))...

Structure

--U              C   AUUu       c 
   GGUCGUAUGUAUGA GUC    acuucaa  
   |||||||||||||| |||    ||||||| g
   UCGGCAUGUAUACU CAG    Ugagguu  
UCG              A   ----       u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-489-5p

• Accession: MIMAT0032657
• Description: Salmo salar ssa-miR-489-5p mature miRNA
• Sequence: 1 - UGGUCGUAUGUAUGACGUCAUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-489-3p

• Accession: MIMAT0032658
• Description: Salmo salar ssa-miR-489-3p mature miRNA
• Sequence: 40 - UGACAUCAUAUGUACGGCUGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482