Stem-loop ssa-mir-551

Accession

MI0026720

Description

Salmo salar ssa-mir-551 precursor miRNA

Gene family

MIPF0000360; mir-551

Sequence

GAAACCAAGUGUGGGUGUGGCCUggaaugacaauaugGCGACCCAUCCUUGGUUUCUG
(((((((((.((((((...(((..............))).)))))).)))))))))..

Structure

--         U      GUG   Uggaau 
  GAAACCAAG GUGGGU   GCC      g
  ||||||||| ||||||   |||       
  CUUUGGUUC UACCCA   CGg      a
GU         C      --G   uauaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-551-5p

• Accession: MIMAT0032663
• Description: Salmo salar ssa-miR-551-5p mature miRNA
• Sequence: 1 - GAAACCAAGUGUGGGUGUGGCCU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-551-3p

• Accession: MIMAT0032664
• Description: Salmo salar ssa-miR-551-3p mature miRNA
• Sequence: 38 - GCGACCCAUCCUUGGUUUCUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482