miRBase entry: ssa-mir-7132a

Stem-loop ssa-mir-7132a


Accession
MI0026721
Description
Salmo salar ssa-mir-7132a precursor miRNA
Gene family
MIPF0002098; mir-7132

Literature search
1 open access papers mention ssa-mir-7132a
(11 sentences)

Sequence

GACUUGGUCAAAGCUCCUCAGUgaugaguagaaaccUGAGAAGUUUGGAACAAGUAAA
.(((((.((.(((((.(((((..............))))).))))).)).)))))...

Structure
--G     G  A     C     Ugauga 
   ACUUG UC AAGCU CUCAG      g
   ||||| || ||||| |||||       
   UGAAC AG UUUGA GAGUc      u
AAA     A  G     A     caaaga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-7132a-5p

Accession MIMAT0032665
Description Salmo salar ssa-miR-7132a-5p mature miRNA
Sequence 1 - GACUUGGUCAAAGCUCCUCAGU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-7132a-3p

Accession MIMAT0032666
Description Salmo salar ssa-miR-7132a-3p mature miRNA
Sequence 37 - UGAGAAGUUUGGAACAAGUAAA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482