miRBase entry: ssa-mir-723-1

Stem-loop ssa-mir-723-1


Accession
MI0026724
Description
Salmo salar ssa-mir-723-1 precursor miRNA
Gene family
MIPF0001831; mir-723


Sequence

GGCAGCUUUGAAUGAUGUUACUucuuauuacuuaaagaAGACAUCAGAUAAAUCUGUGCU
.((((.((((..((((((..((((((........))))))))))))..)))).))))...

Structure
--G    C    AA      UA      auu 
   GCAG UUUG  UGAUGU  CUucuu   a
   |||| ||||  ||||||  ||||||    
   UGUC AAAU  ACUACA  GAagaa   c
UCG    U    AG      --      auu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-723-5p

Accession MIMAT0032669
Description Salmo salar ssa-miR-723-5p mature miRNA
Sequence 1 - GGCAGCUUUGAAUGAUGUUACU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-723-3p

Accession MIMAT0032670
Description Salmo salar ssa-miR-723-3p mature miRNA
Sequence 39 - AGACAUCAGAUAAAUCUGUGCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482