Stem-loop ssa-mir-7a-3

Accession

MI0026747

Description

Salmo salar ssa-mir-7a-3 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

UGGAAGACUAGUGAUUUUGUUGUuuuuaguuagaugaaucgaCAACAAAUCACAGUCUGCCAAA
(((.(((((.(((((((.((((((((((......))))..)))))))))))))))))).)))..

Structure

--   A     A       U      --    gu 
  UGG AGACU GUGAUUU GUUGUu  uuua  u
  ||| ||||| ||||||| ||||||  ||||   
  ACC UCUGA CACUAAA CAACag  aagu  a
AA   G     -       -      cu    ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7a-5p

• Accession: MIMAT0032693
• Description: Salmo salar ssa-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7a-3-3p

• Accession: MIMAT0032696
• Description: Salmo salar ssa-miR-7a-3-3p mature miRNA
• Sequence: 43 - CAACAAAUCACAGUCUGCCAAA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482