Stem-loop ssa-mir-92b

Accession

MI0026762

Description

Salmo salar ssa-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

3 open access papers mention ssa-mir-92b
(11 sentences)

Sequence

AGGUGUGGGAUGUGGUGCACUGUUguacaaugcccucccaaUAUUGCACUCGUCCCGGCCUCC
((((.(((((((.((((((.(((((.............))))).)))))))))))))))))..

Structure

--    G       U      C     uacaa 
  AGGU UGGGAUG GGUGCA UGUUg     u
  |||| ||||||| |||||| |||||     g
  UCCG GCCCUGC UCACGU AUaac     c
CC    -       -      U     ccucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-92b-5p

• Accession: MIMAT0032711
• Description: Salmo salar ssa-miR-92b-5p mature miRNA
• Sequence: 1 - AGGUGUGGGAUGUGGUGCACUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-92b-3p

• Accession: MIMAT0032712
• Description: Salmo salar ssa-miR-92b-3p mature miRNA
• Sequence: 42 - UAUUGCACUCGUCCCGGCCUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482