Stem-loop ssa-mir-96-2

Accession

MI0026766

Description

Salmo salar ssa-mir-96-2 precursor miRNA

Gene family

MIPF0000072; mir-96

Sequence

UUUGGCACUAGCACAUUUUUGCUucuguauauaucuguuugagCAAUCAUGUGUAGUGCCAAUAU
.(((((((((.(((((..((((((....(((....)))..))))))..))))))))))))))...

Structure

--U         G     UU      cugu   u 
   UUGGCACUA CACAU  UUGCUu    aua a
   ||||||||| |||||  ||||||    |||  
   AACCGUGAU GUGUA  AACgag    ugu u
UAU         -     CU      --uu   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-96-5p

• Accession: MIMAT0032716
• Description: Salmo salar ssa-miR-96-5p mature miRNA
• Sequence: 1 - UUUGGCACUAGCACAUUUUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-96-3p

• Accession: MIMAT0032717
• Description: Salmo salar ssa-miR-96-3p mature miRNA
• Sequence: 44 - CAAUCAUGUGUAGUGCCAAUAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482