miRBase entry: ssa-mir-7552a-2

Stem-loop ssa-mir-7552a-2


Accession
MI0026789
Description
Salmo salar ssa-mir-7552a-2 precursor miRNA
Gene family
MIPF0001916; mir-7552

Literature search
1 open access papers mention ssa-mir-7552a-2
(1 sentences)

Sequence

UUACAAUUAAAGGAUAUUUCUUgcgauugaauaugagacggAAAUUUCCCUUAAUUGUUUGGC
..((((((((.(((.((((((..(............)..)))))).))).)))))))).....

Structure
---UU        A   U      Ug gauug 
     ACAAUUAA GGA AUUUCU  c     a
     |||||||| ||| ||||||  |      
     UGUUAAUU CCU UAAAgg  g     a
CGGUU        C   U      ca aguau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-7552a-5p

Accession MIMAT0032752
Description Salmo salar ssa-miR-7552a-5p mature miRNA
Sequence 1 - UUACAAUUAAAGGAUAUUUCUU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-7552a-2-3p

Accession MIMAT0032754
Description Salmo salar ssa-miR-7552a-2-3p mature miRNA
Sequence 42 - AAAUUUCCCUUAAUUGUUUGGC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482