miRBase entry: ssa-mir-8164

Stem-loop ssa-mir-8164


Accession
MI0026792
Description
Salmo salar ssa-mir-8164 precursor miRNA

Literature search
1 open access papers mention ssa-mir-8164
(1 sentences)

Sequence

CAGAGGUAUUGUAAUAUCGUGAuacuacaauacucaccACGAUACGGCGAUAAUUCUGAU
(((((.((((((..(((((((................)))))))..)))))).)))))..

Structure
--     G      AA       Auacuac 
  CAGAG UAUUGU  UAUCGUG       a
  ||||| ||||||  |||||||        
  GUCUU AUAGCG  AUAGCAc       a
UA     A      GC       cacucau 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-8164-5p

Accession MIMAT0032759
Description Salmo salar ssa-miR-8164-5p mature miRNA
Sequence 1 - CAGAGGUAUUGUAAUAUCGUGA - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-8164-3p

Accession MIMAT0032760
Description Salmo salar ssa-miR-8164-3p mature miRNA
Sequence 39 - ACGAUACGGCGAUAAUUCUGAU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482