Stem-loop ath-MIR8178

Accession

MI0026808

Description

Arabidopsis thaliana ath-MIR8178 precursor miRNA

Sequence

uauuggaguacauaggccaguuuagauuaauucuauuuguucgguuuaguauugguuagaucuuauaccacacuuguauaUAACAGAGUAAUUGUACAGUGuaaucauuagaacuuucucauucaucuuaaugauuacacuguacaauuacucuguuauauacaagugugguauaagaucuaaccaauacuaaaccgaacaaauagaauuaaucuaaaccggccuauguacuccaaua
((((((((((((((((((.(((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((.............)).))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))).))))))))))))))))))

Structure

                  a                                                                                           -  acuuu 
uauuggaguacauaggcc guuuagauuaauucuauuuguucgguuuaguauugguuagaucuuauaccacacuuguauaUAACAGAGUAAUUGUACAGUGuaaucauua ga     c
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     u
auaaccucauguauccgg caaaucuaauuaagauaaacaagccaaaucauaaccaaucuagaauauggugugaacauauauugucucauuaacaugucacauuaguaau cu     c
                  c                                                                                           u  acuua 

Annotation confidence Not enough data

Genome context

chr4: 18087205-18087442 [+]

Mature ath-miR8178

• Accession: MIMAT0032777
• Description: Arabidopsis thaliana ath-miR8178 mature miRNA
• Sequence: 81 - UAACAGAGUAAUUGUACAGUG - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701