miRBase entry: cel-mir-8189

Stem-loop cel-mir-8189


Accession
MI0026820
Description
Caenorhabditis elegans cel-mir-8189 precursor miRNA


Sequence

363 reads, 7 reads per million, 10 experiments
UCUCUUAUCCACUAGGCCACGAgugccagcgcccucaaggagucggguccgcAUGGCCUAGUGGAUAAGAGGGA
(((((((((((((((((((.(.(.(((.((.((.....)).))..))).).).)))))))))))))))))))..

Structure
--                   C A u   -a  g  c 
  UCUCUUAUCCACUAGGCCA G g gcc  gc cc u
  ||||||||||||||||||| | | |||  || || c
  GGAGAAUAGGUGAUCCGGU c c ugg  ug gg a
AG                   A g c   gc  a  a 


Annotation confidence Not enough data
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Genome context
chrIV: 2079009-2079082 [+]

Database links

Mature cel-miR-8189-5p

Accession MIMAT0032791
Description Caenorhabditis elegans cel-miR-8189-5p mature miRNA
Sequence 1 - UCUCUUAUCCACUAGGCCACGA - 22
Evidence experimental
SOLiD [1]

Mature cel-miR-8189-3p

Accession MIMAT0032792
Description Caenorhabditis elegans cel-miR-8189-3p mature miRNA
Sequence 53 - AUGGCCUAGUGGAUAAGAGGGA - 74
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260