miRBase entry: cel-mir-8196b

Stem-loop cel-mir-8196b


Accession
MI0026837
Description
Caenorhabditis elegans cel-mir-8196b precursor miRNA
Gene family
MIPF0002057; mir-8196


Sequence

1117 reads, 4 reads per million, 14 experiments
CCCAUAGAAAUAUUUUCUAUGUCaaccucuuguacgguugcUGUAGUUAAUUUUUUCUUUGGGAA
((((.(((((.(((..(((((.(((((........))))).)))))..)))..))))).))))..

Structure
--    U     -U   UU     U     ucu 
  CCCA AGAAA  AUU  CUAUG Caacc   u
  |||| |||||  |||  ||||| |||||    
  GGGU UCUUU  UAA  GAUGU guugg   g
AA    U     UU   UU     c     cau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 14324406-14324470 [-]

Database links

Mature cel-miR-8196b-5p

Accession MIMAT0032825
Description Caenorhabditis elegans cel-miR-8196b-5p mature miRNA
Sequence 1 - CCCAUAGAAAUAUUUUCUAUGUC - 23
Evidence experimental
Illumina [1]

Mature cel-miR-8196b-3p

Accession MIMAT0032826
Description Caenorhabditis elegans cel-miR-8196b-3p mature miRNA
Sequence 42 - UGUAGUUAAUUUUUUCUUUGGGAA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260