miRBase entry: cel-mir-2217b-2

Stem-loop cel-mir-2217b-2


Accession
MI0026845
Description
Caenorhabditis elegans cel-mir-2217b-2 precursor miRNA
Gene family
MIPF0001912; mir-2217


Sequence

46 reads, 1 reads per million, 9 experiments
CAGAGUGGGCAGUCGGUGUCAAUCugcaacaaaagcaguUUGACCCUUGUGCUUGUUUCGGC
..(((.(((((...((.(((((.((((.......)))).)))))))...)))))..)))...

Structure
-CA   -U     GUC  U     U    aa 
   GAG  GGGCA   GG GUCAA Cugc  c
   |||  |||||   || ||||| ||||  a
   CUU  UUCGU   CC CAGUU gacg  a
CGG   UG     GUU  -     u    aa 


Annotation confidence Not enough data
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Genome context
chrII: 13619493-13619554 [-]

Database links

Mature cel-miR-2217b-3p

Accession MIMAT0032840
Description Caenorhabditis elegans cel-miR-2217b-3p mature miRNA
Sequence 40 - UUGACCCUUGUGCUUGUUUCGGC - 62
Evidence experimental
Illumina [1]

Mature cel-miR-2217b-5p

Accession MIMAT0032841
Description Caenorhabditis elegans cel-miR-2217b-5p mature miRNA
Sequence 1 - CAGAGUGGGCAGUCGGUGUCAAUC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260