Stem-loop ppc-mir-8229a

Accession

MI0026878

Description

Pristionchus pacificus ppc-mir-8229a precursor miRNA

Gene family

MIPF0001992; mir-8229

Sequence

CUUUGUCUUCACGAGGCUGAACGCgauauugaaagcGAUCGCAUCGUGAGAGGCUAAGG
(((.((((((((((.((.((.(((..........))).)))).)))))).)))).))).

Structure

-   U    -      G  U  A   gaua 
 CUU GUCU UCACGA GC GA CGC    u
 ||| |||| |||||| || || |||     
 GAA CGGA AGUGCU CG CU Gcg    u
G   U    G      A  -  A   aaag 

Annotation confidence Not enough data

Genome context

ABKE03000038.1: 818221-818279 [+]

Mature ppc-miR-8229a-5p

• Accession: MIMAT0032902
• Description: Pristionchus pacificus ppc-miR-8229a-5p mature miRNA
• Sequence: 1 - CUUUGUCUUCACGAGGCUGAACGC - 24
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8229a-3p

• Accession: MIMAT0032903
• Description: Pristionchus pacificus ppc-miR-8229a-3p mature miRNA
• Sequence: 37 - GAUCGCAUCGUGAGAGGCUAAGG - 59
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260