Stem-loop ppc-mir-8250a-2

Accession

MI0026921

Description

Pristionchus pacificus ppc-mir-8250a-2 precursor miRNA

Gene family

MIPF0002067; mir-8250

Sequence

CUCUCUAUUUGCCUGGAUUCGAUUGuaauugagaucaAUCUCCAGUCAUAAUGGGGGGCA
(((((((((((.(((((...(((((..........)))))))))).)).)))))))))..

Structure

--         -  C     UUC     uaau 
  CUCUCUAUU UG CUGGA   GAUUG    u
  ||||||||| || |||||   |||||     
  GGGGGGUAA AC GACCU   CUAac    g
AC         U  U     ---     uaga 

Annotation confidence Not enough data

Genome context

ABKE03000013.1: 83122-83181 [-]

Mature ppc-miR-8250a-5p

• Accession: MIMAT0032964
• Description: Pristionchus pacificus ppc-miR-8250a-5p mature miRNA
• Sequence: 1 - CUCUCUAUUUGCCUGGAUUCGAUUG - 25
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8250a-2-3p

• Accession: MIMAT0032988
• Description: Pristionchus pacificus ppc-miR-8250a-2-3p mature miRNA
• Sequence: 38 - AUCUCCAGUCAUAAUGGGGGGCA - 60
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260