miRBase entry: ppc-mir-8267

Stem-loop ppc-mir-8267


Accession
MI0026938
Description
Pristionchus pacificus ppc-mir-8267 precursor miRNA


Sequence

UGAUUCUUCUCUUGUCAUCGGAaaauauuuucUCAUGACUCUAGAAGAAUCAGC
((((((((((...(((((.(((((....))))).)))))...))))))))))..

Structure
--          CUU     C     a 
  UGAUUCUUCU   GUCAU GGAaa u
  ||||||||||   ||||| |||||  
  ACUAAGAAGA   CAGUA Ucuuu a
CG          UCU     C     u 


Annotation confidence Not enough data
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Genome context
ABKE03000048.1: 428850-428903 [+]

Database links

Mature ppc-miR-8267-5p

Accession MIMAT0033020
Description Pristionchus pacificus ppc-miR-8267-5p mature miRNA
Sequence 1 - UGAUUCUUCUCUUGUCAUCGGA - 22
Evidence experimental
Illumina [1]

Mature ppc-miR-8267-3p

Accession MIMAT0033021
Description Pristionchus pacificus ppc-miR-8267-3p mature miRNA
Sequence 33 - UCAUGACUCUAGAAGAAUCAGC - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260