miRBase entry: ppc-mir-76

Stem-loop ppc-mir-76


Accession
MI0026972
Description
Pristionchus pacificus ppc-mir-76 precursor miRNA


Sequence

AUGACUUUCCACUCAGCGAAUAuuacauacaauucauaUUCGUUGUUUGCGAAAUUCAUGC
((((.((((((..((((((((((............))))))))))..)).)))).))))..

Structure
--    C    -  CU          uacau 
  AUGA UUUC CA  CAGCGAAUAu     a
  |||| |||| ||  ||||||||||      
  UACU AAAG GU  GUUGCUUaua     c
CG    U    C  UU          cuuaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ABKE03000023.1: 274526-274586 [-]

Database links

Mature ppc-miR-76-5p

Accession MIMAT0033087
Description Pristionchus pacificus ppc-miR-76-5p mature miRNA
Sequence 1 - AUGACUUUCCACUCAGCGAAUA - 22
Evidence experimental
Illumina [1]

Mature ppc-miR-76-3p

Accession MIMAT0033088
Description Pristionchus pacificus ppc-miR-76-3p mature miRNA
Sequence 39 - UUCGUUGUUUGCGAAAUUCAUGC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260