miRBase entry: ppc-mir-8317a

Stem-loop ppc-mir-8317a


Accession
MI0026973
Description
Pristionchus pacificus ppc-mir-8317a precursor miRNA


Sequence

AUGGGCUUUCCGAGACUAUUCGAgaauguacgaauuCGAAUAUCUCGCUAAGUCUGAGA
..((((((..(((((.((((((((..........)))))))))))))..))))))....

Structure
--AU      UC     C        aaug 
    GGGCUU  CGAGA UAUUCGAg    u
    ||||||  ||||| ||||||||     
    UCUGAA  GCUCU AUAAGCuu    a
AGAG      UC     -        aagc 


Annotation confidence Not enough data
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Genome context
ABKE03000073.1: 33133-33191 [-]

Database links

Mature ppc-miR-8317a-5p

Accession MIMAT0033089
Description Pristionchus pacificus ppc-miR-8317a-5p mature miRNA
Sequence 1 - AUGGGCUUUCCGAGACUAUUCGA - 23
Evidence experimental
Illumina [1]

Mature ppc-miR-8317a-3p

Accession MIMAT0033090
Description Pristionchus pacificus ppc-miR-8317a-3p mature miRNA
Sequence 37 - CGAAUAUCUCGCUAAGUCUGAGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260