Stem-loop ppc-mir-8364v

Accession

MI0026983

Description

Pristionchus pacificus ppc-mir-8364v precursor miRNA

Gene family

MIPF0001877; mir-8364

Sequence

CUCUCCAUUUCACAUGCUCUCUCaccggucagagaggcgagAAAGCAUGCGACAUGAGGAGAG
((((((((.((.((((((.((((.((.........)).)))).)))))).)).))..))))))

Structure

      --  U  A      C    a  ggu 
CUCUCC  AU UC CAUGCU UCUC cc   c
||||||  || || |||||| |||| ||   a
GAGAGG  UA AG GUACGA Agag gg   g
      AG  C  C      A    c  aga 

Annotation confidence Not enough data

Genome context

ABKE03000021.1: 3467925-3467987 [-]

Mature ppc-miR-8364v-5p

• Accession: MIMAT0033107
• Description: Pristionchus pacificus ppc-miR-8364v-5p mature miRNA
• Sequence: 1 - CUCUCCAUUUCACAUGCUCUCUC - 23
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-8364v-3p

• Accession: MIMAT0033108
• Description: Pristionchus pacificus ppc-miR-8364v-3p mature miRNA
• Sequence: 42 - AAAGCAUGCGACAUGAGGAGAG - 63
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260