Stem-loop ppc-mir-8229b

Accession

MI0027001

Description

Pristionchus pacificus ppc-mir-8229b precursor miRNA

Gene family

MIPF0001992; mir-8229

Sequence

CAUAGUCUUCAUGAGGUUGAACGuuauauugaaagcgUUGACUUCGUGAGAGGCUAAGGG
..((((((((((((((((.((((((........)))))))))))))))).))))))....

Structure

--CA      -          G      aua 
    UAGUCU UCAUGAGGUU AACGuu   u
    |||||| |||||||||| ||||||    
    AUCGGA AGUGCUUCAG UUgcga   u
GGGA      G          -      aag 

Annotation confidence Not enough data

Genome context

ABKE03000053.1: 1505461-1505520 [-]

Mature ppc-miR-8229b-5p

• Accession: MIMAT0033142
• Description: Pristionchus pacificus ppc-miR-8229b-5p mature miRNA
• Sequence: 1 - CAUAGUCUUCAUGAGGUUGAACG - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8229b-3p

• Accession: MIMAT0033143
• Description: Pristionchus pacificus ppc-miR-8229b-3p mature miRNA
• Sequence: 38 - UUGACUUCGUGAGAGGCUAAGGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260