miRBase entry: ppc-mir-8310

Stem-loop ppc-mir-8310


Accession
MI0027005
Description
Pristionchus pacificus ppc-mir-8310 precursor miRNA


Sequence

GAGCGGGUGUAGAUAGACAUGCCAaucucaUAUCUUCUGUCGUCCGGUCCAGC
((.((((((((((.(((.(((.......))).))))))).)))))).))....

Structure
----  G      -    U   C   CC 
    GA CGGGUG UAGA AGA AUG  A
    || |||||| |||| ||| |||  a
    CU GCCUGC GUCU UCU Uac  u
CGAC  G      U    -   A   uc 


Annotation confidence Not enough data
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Genome context
ABKE03000076.1: 529827-529879 [+]

Database links

Mature ppc-miR-8310-5p

Accession MIMAT0033150
Description Pristionchus pacificus ppc-miR-8310-5p mature miRNA
Sequence 1 - GAGCGGGUGUAGAUAGACAUGCCA - 24
Evidence experimental
Illumina [1]

Mature ppc-miR-8310-3p

Accession MIMAT0033151
Description Pristionchus pacificus ppc-miR-8310-3p mature miRNA
Sequence 31 - UAUCUUCUGUCGUCCGGUCCAGC - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260