miRBase entry: ppc-mir-8314

Stem-loop ppc-mir-8314


Accession
MI0027012
Description
Pristionchus pacificus ppc-mir-8314 precursor miRNA


Sequence

AGAUUCAUAUGAGACAACUAGAuugauugucuaucUAGCUGCCUCAGAAUGAGUCUAA
((((((((.((((.((.((((((.((...)).)))))).)).))))..))))))))..

Structure
--        -A    A  A      u  u 
  AGAUUCAU  UGAG CA CUAGAu ga  
  ||||||||  |||| || |||||| || u
  UCUGAGUA  ACUC GU GAUcua cu  
AA        AG    C  C      u  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ABKE03000049.1: 123523-123580 [+]

Database links

Mature ppc-miR-8314-5p

Accession MIMAT0033163
Description Pristionchus pacificus ppc-miR-8314-5p mature miRNA
Sequence 1 - AGAUUCAUAUGAGACAACUAGA - 22
Evidence experimental
Illumina [1]

Mature ppc-miR-8314-3p

Accession MIMAT0033164
Description Pristionchus pacificus ppc-miR-8314-3p mature miRNA
Sequence 36 - UAGCUGCCUCAGAAUGAGUCUAA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260