miRBase entry: ppc-mir-8318

Stem-loop ppc-mir-8318


Accession
MI0027018
Description
Pristionchus pacificus ppc-mir-8318 precursor miRNA


Sequence

GUUAUGAUCGAUGAAGCACGUGcgcauaaugcgcaUCGGCUUCAUCGAUUAUGACC
(((((((((((((((((.((((((((...)))))).))))))))))))))))))).

Structure
-                 A  -      u 
 GUUAUGAUCGAUGAAGC CG UGcgca  
 ||||||||||||||||| || |||||| a
 CAGUAUUAGCUACUUCG GC acgcgu  
C                 -  U      a 


Annotation confidence Not enough data
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Genome context
ABKE03000041.1: 1949102-1949157 [+]

Database links

Mature ppc-miR-8318-5p

Accession MIMAT0033174
Description Pristionchus pacificus ppc-miR-8318-5p mature miRNA
Sequence 1 - GUUAUGAUCGAUGAAGCACGUG - 22
Evidence experimental
Illumina [1]

Mature ppc-miR-8318-3p

Accession MIMAT0033175
Description Pristionchus pacificus ppc-miR-8318-3p mature miRNA
Sequence 36 - UCGGCUUCAUCGAUUAUGACC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260